MOLECULAR MECHANICS STUDIES ON THE MUTATED AMINO ACID REGIONS AND MOTIFS OF LDLR (LOW-DENSITY LIPOPROTEIN RECEPTOR) AND THEIR 3D VISUALIZATION Authors: M Aarthi , SHAKILA L, N. JANANI AND M. AGALYA
ABSTRACT
The most important genetic cause of Familial Hypercholesterolemia (FH) is mutations occurring
in the LDLR gene encoding the Low-density Lipoprotein Receptor. Mutations in this domain
account for 51.7% of the total missense variants observed in LDLR. The aim of the current
Insilico research work is to find out the involvement of the mutated amino acids in the HTH
motifs regions of LDLR protein 3D structure using Insilico protocols. At first, Insilico study was
carried out using HTH (Helix-Turn-Helix) motif tool and the HTH motifs regions present in the
LDLR protein sequence was identified. Secondarily, the 3D structure of the selected LDLR
sequence was explored using an automated homology modelling server and was visualized using
an advanced molecular visualization software in order to identify the HTH motifs regions present
in the mutated amino acids. The results obtained from this study shows that the mutated amino
acids are directly involved in the HTH motif regions. The overall results clearly elucidate that the
mutated amino acids are present in the HTH motifs regions and play a vital role in the field of
research related to Structure Based –Drug Designing and clinical Pharmacology.
Keywords: LDLR, Protein Modelling and HTH (Helix-Turn-Helix) motifs Publication date: 01/10/2022 https://ijbpas.com/pdf/2022/October/MS_IJBPAS_2022_6506.pdfDownload PDFhttps://doi.org/10.31032/IJBPAS/2022/11.10.6506